Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Gm11964-201ENSMUST00000120982 444 ntBASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Daam2-202ENSMUST00000224595 1926 ntBASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3aQ9JKX8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Upk3aQ9JKX8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms