Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm45501-201ENSMUST00000211468 2526 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm5380-201ENSMUST00000119296 2136 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm12091-201ENSMUST00000146791 830 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm6283-201ENSMUST00000182369 1000 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm31326-201ENSMUST00000191856 1048 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm37917-201ENSMUST00000194711 392 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm42612-201ENSMUST00000197986 623 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm6745-201ENSMUST00000199216 526 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm43170-201ENSMUST00000199827 612 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 AC154239.3-201ENSMUST00000226933 674 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 AC154806.6-201ENSMUST00000228192 202 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Gm15823-201ENSMUST00000064305 670 ntBASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Mrpl55Q9CZ83 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Gm18018-201ENSMUST00000198273 408 ntBASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Gm44608-201ENSMUST00000206827 855 ntBASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms