Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ska1Q9CPV1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ska1Q9CPV1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Ska1Q9CPV1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ska1Q9CPV1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ska1Q9CPV1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ska1Q9CPV1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ska1Q9CPV1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Gm20949-201ENSMUST00000206478 952 ntBASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ska1Q9CPV1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Gm22189-201ENSMUST00000103822 86 ntBASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ska1Q9CPV1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms