Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 AC020914.3-201ENST00000594712 304 ntBASIC19.44■□□□□ 0.7
BRIP1Q9BX63 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 AC015967.2-201ENST00000624092 234 ntBASIC19.44■□□□□ 0.7
BRIP1Q9BX63 AC006435.4-201ENST00000625037 234 ntBASIC19.44■□□□□ 0.7
BRIP1Q9BX63 AL356737.1-201ENST00000634391 234 ntBASIC19.44■□□□□ 0.7
BRIP1Q9BX63 ALOX12P2-203ENST00000570921 1945 ntBASIC19.44■□□□□ 0.7
BRIP1Q9BX63 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.44■□□□□ 0.7
BRIP1Q9BX63 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 AL662890.1-201ENST00000396818 632 ntBASIC19.43■□□□□ 0.7
BRIP1Q9BX63 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 AL590640.2-201ENST00000457038 527 ntBASIC19.43■□□□□ 0.7
BRIP1Q9BX63 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 AC016629.1-201ENST00000596579 586 ntBASIC19.43■□□□□ 0.7
BRIP1Q9BX63 AL096828.3-201ENST00000615354 462 ntBASIC19.43■□□□□ 0.7
BRIP1Q9BX63 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
BRIP1Q9BX63 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.42■□□□□ 0.7
BRIP1Q9BX63 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 OR6D1P-202ENST00000641007 5290 ntBASIC19.42■□□□□ 0.7
BRIP1Q9BX63 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRIP1Q9BX63 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms