Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Gm15427-201ENSMUST00000117288 531 ntBASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Gm17271-201ENSMUST00000165535 355 ntBASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc9Q8VC31 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Gm14494-201ENSMUST00000118786 435 ntBASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Gm9466-201ENSMUST00000218144 2246 ntBASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Gm43931-201ENSMUST00000204817 2870 ntBASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc9Q8VC31 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Gm27525-201ENSMUST00000184465 107 ntBASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Gm5264-201ENSMUST00000190584 848 ntBASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc9Q8VC31 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Ccdc9Q8VC31 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc9Q8VC31 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms