Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cystm1Q8K353 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Cystm1Q8K353 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cystm1Q8K353 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Cystm1Q8K353 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC8.08□□□□□ -1.12
Cystm1Q8K353 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Cystm1Q8K353 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm7224-201ENSMUST00000121359 2066 ntBASIC8.07□□□□□ -1.12
Cystm1Q8K353 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 AC126257.2-201ENSMUST00000215507 2300 ntBASIC8.07□□□□□ -1.12
Cystm1Q8K353 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm7488-201ENSMUST00000117148 684 ntBASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm12151-201ENSMUST00000121374 290 ntBASIC8.07□□□□□ -1.12
Cystm1Q8K353 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm9229-201ENSMUST00000222777 126 ntBASIC8.07□□□□□ -1.12
Cystm1Q8K353 Shd-206ENSMUST00000225145 998 ntBASIC8.07□□□□□ -1.12
Cystm1Q8K353 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm13127-201ENSMUST00000118978 1389 ntBASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.07□□□□□ -1.12
Cystm1Q8K353 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC8.07□□□□□ -1.12
Cystm1Q8K353 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Cystm1Q8K353 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Syt7-204ENSMUST00000223586 1344 ntBASIC8.06□□□□□ -1.12
Cystm1Q8K353 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Gm9109-201ENSMUST00000120254 1405 ntBASIC8.06□□□□□ -1.12
Cystm1Q8K353 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Cystm1Q8K353 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms