Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CroccQ8CJ40 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CroccQ8CJ40 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CroccQ8CJ40 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.26□□□□□ -0.45
CroccQ8CJ40 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CroccQ8CJ40 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CroccQ8CJ40 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.25□□□□□ -0.45
CroccQ8CJ40 Gm8602-201ENSMUST00000184045 607 ntBASIC12.25□□□□□ -0.45
CroccQ8CJ40 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.25□□□□□ -0.45
CroccQ8CJ40 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.25□□□□□ -0.45
CroccQ8CJ40 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.25□□□□□ -0.45
CroccQ8CJ40 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.25□□□□□ -0.45
CroccQ8CJ40 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CroccQ8CJ40 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.24□□□□□ -0.45
CroccQ8CJ40 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Gm40466-201ENSMUST00000212174 422 ntBASIC12.24□□□□□ -0.45
CroccQ8CJ40 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.24□□□□□ -0.45
CroccQ8CJ40 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.24□□□□□ -0.45
CroccQ8CJ40 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.24□□□□□ -0.45
CroccQ8CJ40 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CroccQ8CJ40 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CroccQ8CJ40 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CroccQ8CJ40 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CroccQ8CJ40 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CroccQ8CJ40 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CroccQ8CJ40 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CroccQ8CJ40 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CroccQ8CJ40 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.23□□□□□ -0.45
CroccQ8CJ40 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CroccQ8CJ40 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms