Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cps1Q8C196 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cps1Q8C196 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Cps1Q8C196 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cps1Q8C196 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Cps1Q8C196 Gm11892-201ENSMUST00000117711 1202 ntBASIC16.91■□□□□ 0.3
Cps1Q8C196 Gm11511-201ENSMUST00000118146 540 ntBASIC16.91■□□□□ 0.3
Cps1Q8C196 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC16.91■□□□□ 0.3
Cps1Q8C196 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC16.91■□□□□ 0.3
Cps1Q8C196 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC16.91■□□□□ 0.3
Cps1Q8C196 Gm9132-201ENSMUST00000210182 832 ntBASIC16.91■□□□□ 0.3
Cps1Q8C196 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC16.91■□□□□ 0.3
Cps1Q8C196 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 CT009713.8-202ENSMUST00000224732 385 ntBASIC16.91■□□□□ 0.3
Cps1Q8C196 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cps1Q8C196 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC16.9■□□□□ 0.3
Cps1Q8C196 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Gm4993-201ENSMUST00000118719 1174 ntBASIC16.9■□□□□ 0.3
Cps1Q8C196 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC16.9■□□□□ 0.3
Cps1Q8C196 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Gm43520-201ENSMUST00000197996 164 ntBASIC16.9■□□□□ 0.3
Cps1Q8C196 Gm8956-201ENSMUST00000203939 825 ntBASIC16.9■□□□□ 0.3
Cps1Q8C196 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC16.9■□□□□ 0.3
Cps1Q8C196 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC16.9■□□□□ 0.3
Cps1Q8C196 CT030637.1-201ENSMUST00000228016 669 ntBASIC16.9■□□□□ 0.3
Cps1Q8C196 Snora73b-201ENSMUST00000083419 205 ntBASIC16.9■□□□□ 0.3
Cps1Q8C196 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cps1Q8C196 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cps1Q8C196 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cps1Q8C196 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.89■□□□□ 0.3
Cps1Q8C196 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cps1Q8C196 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cps1Q8C196 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cps1Q8C196 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cps1Q8C196 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cps1Q8C196 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cps1Q8C196 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC16.89■□□□□ 0.29
Cps1Q8C196 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cps1Q8C196 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.89■□□□□ 0.29
Cps1Q8C196 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC16.89■□□□□ 0.29
Cps1Q8C196 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Cps1Q8C196 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC16.89■□□□□ 0.29
Cps1Q8C196 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC16.89■□□□□ 0.29
Cps1Q8C196 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC16.89■□□□□ 0.29
Cps1Q8C196 Gm5705-201ENSMUST00000066241 711 ntBASIC16.89■□□□□ 0.29
Cps1Q8C196 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cps1Q8C196 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cps1Q8C196 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cps1Q8C196 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.88■□□□□ 0.29
Cps1Q8C196 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC16.88■□□□□ 0.29
Cps1Q8C196 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC16.88■□□□□ 0.29
Cps1Q8C196 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Gm8492-201ENSMUST00000182375 987 ntBASIC16.88■□□□□ 0.29
Cps1Q8C196 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC16.88■□□□□ 0.29
Cps1Q8C196 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC16.88■□□□□ 0.29
Cps1Q8C196 Gm2517-201ENSMUST00000215651 348 ntBASIC16.88■□□□□ 0.29
Cps1Q8C196 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cps1Q8C196 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cps1Q8C196 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cps1Q8C196 Gm9129-201ENSMUST00000218173 1689 ntBASIC16.88■□□□□ 0.29
Cps1Q8C196 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cps1Q8C196 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms