Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.81□□□□□ -0.04
Scn9aQ62205 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn9aQ62205 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.81□□□□□ -0.04
Scn9aQ62205 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Scn9aQ62205 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Gm12857-201ENSMUST00000117678 592 ntBASIC14.8□□□□□ -0.04
Scn9aQ62205 Gm6485-201ENSMUST00000160676 439 ntBASIC14.8□□□□□ -0.04
Scn9aQ62205 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Scn9aQ62205 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scn9aQ62205 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn9aQ62205 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scn9aQ62205 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Scn9aQ62205 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.8□□□□□ -0.04
Scn9aQ62205 Gm25072-201ENSMUST00000175233 235 ntBASIC14.8□□□□□ -0.04
Scn9aQ62205 Gm3793-201ENSMUST00000204973 672 ntBASIC14.8□□□□□ -0.04
Scn9aQ62205 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.8□□□□□ -0.04
Scn9aQ62205 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn9aQ62205 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn9aQ62205 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scn9aQ62205 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn9aQ62205 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Scn9aQ62205 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.79□□□□□ -0.04
Scn9aQ62205 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.79□□□□□ -0.04
Scn9aQ62205 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.79□□□□□ -0.04
Scn9aQ62205 Gm43520-201ENSMUST00000197996 164 ntBASIC14.79□□□□□ -0.04
Scn9aQ62205 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.79□□□□□ -0.04
Scn9aQ62205 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.79□□□□□ -0.04
Scn9aQ62205 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn9aQ62205 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn9aQ62205 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn9aQ62205 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.78□□□□□ -0.04
Scn9aQ62205 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.78□□□□□ -0.04
Scn9aQ62205 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Scn9aQ62205 Gm25951-201ENSMUST00000175330 64 ntBASIC14.78□□□□□ -0.04
Scn9aQ62205 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Scn9aQ62205 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.78□□□□□ -0.04
Scn9aQ62205 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Scn9aQ62205 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Gm11509-201ENSMUST00000117358 325 ntBASIC14.78□□□□□ -0.04
Scn9aQ62205 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.78□□□□□ -0.04
Scn9aQ62205 Gm11451-201ENSMUST00000118946 630 ntBASIC14.78□□□□□ -0.04
Scn9aQ62205 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms