Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccne1Q61457 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Gm12015-201ENSMUST00000117065 843 ntBASIC16.62■□□□□ 0.25
Ccne1Q61457 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Gm24749-201ENSMUST00000157838 343 ntBASIC16.62■□□□□ 0.25
Ccne1Q61457 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.62■□□□□ 0.25
Ccne1Q61457 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Gm37986-201ENSMUST00000193285 383 ntBASIC16.62■□□□□ 0.25
Ccne1Q61457 Gm45433-201ENSMUST00000209386 247 ntBASIC16.62■□□□□ 0.25
Ccne1Q61457 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccne1Q61457 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccne1Q61457 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccne1Q61457 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Ccne1Q61457 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccne1Q61457 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccne1Q61457 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccne1Q61457 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.61■□□□□ 0.25
Ccne1Q61457 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.61■□□□□ 0.25
Ccne1Q61457 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccne1Q61457 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Ccne1Q61457 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.61■□□□□ 0.25
Ccne1Q61457 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccne1Q61457 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Ccne1Q61457 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccne1Q61457 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccne1Q61457 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ccne1Q61457 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.6■□□□□ 0.25
Ccne1Q61457 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccne1Q61457 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Gm10076-201ENSMUST00000073238 384 ntBASIC16.6■□□□□ 0.25
Ccne1Q61457 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccne1Q61457 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccne1Q61457 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccne1Q61457 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccne1Q61457 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.6■□□□□ 0.25
Ccne1Q61457 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccne1Q61457 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccne1Q61457 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.59■□□□□ 0.25
Ccne1Q61457 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccne1Q61457 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccne1Q61457 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccne1Q61457 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccne1Q61457 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
Ccne1Q61457 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccne1Q61457 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccne1Q61457 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccne1Q61457 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccne1Q61457 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms