Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm6244-201ENSMUST00000178732 841 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim43bP86448 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim43bP86448 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim43bP86448 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.22□□□□□ -0.29
Trim43bP86448 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43bP86448 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trim43bP86448 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.21□□□□□ -0.29
Trim43bP86448 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim43bP86448 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim43bP86448 Gm8602-201ENSMUST00000184045 607 ntBASIC13.21□□□□□ -0.29
Trim43bP86448 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim43bP86448 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim43bP86448 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43bP86448 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43bP86448 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43bP86448 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.21□□□□□ -0.3
Trim43bP86448 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43bP86448 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.21□□□□□ -0.3
Trim43bP86448 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43bP86448 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43bP86448 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43bP86448 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trim43bP86448 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43bP86448 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.21□□□□□ -0.3
Trim43bP86448 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43bP86448 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43bP86448 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim43bP86448 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Trim43bP86448 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim43bP86448 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43bP86448 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim43bP86448 Gm27486-201ENSMUST00000184923 80 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Gm2495-201ENSMUST00000191160 466 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Gm38144-201ENSMUST00000192790 465 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Gm7287-201ENSMUST00000205267 602 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Gm5035-201ENSMUST00000215581 927 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Trim43bP86448 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim43bP86448 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim43bP86448 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim43bP86448 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Trim43bP86448 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.2□□□□□ -0.3
Trim43bP86448 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim43bP86448 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43bP86448 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43bP86448 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
Trim43bP86448 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim43bP86448 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim43bP86448 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43bP86448 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms