Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3b6P59708 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.4□□□□□ -0.58
Sf3b6P59708 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sf3b6P59708 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sf3b6P59708 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.4□□□□□ -0.59
Sf3b6P59708 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sf3b6P59708 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.39□□□□□ -0.59
Sf3b6P59708 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.39□□□□□ -0.59
Sf3b6P59708 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.39□□□□□ -0.59
Sf3b6P59708 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.39□□□□□ -0.59
Sf3b6P59708 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.39□□□□□ -0.59
Sf3b6P59708 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Gm26464-201ENSMUST00000157094 305 ntBASIC11.39□□□□□ -0.59
Sf3b6P59708 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Gm24694-201ENSMUST00000180054 110 ntBASIC11.39□□□□□ -0.59
Sf3b6P59708 Gm27663-201ENSMUST00000184839 110 ntBASIC11.39□□□□□ -0.59
Sf3b6P59708 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.39□□□□□ -0.59
Sf3b6P59708 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sf3b6P59708 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3b6P59708 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Mir686-201ENSMUST00000102174 109 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 Gm13813-201ENSMUST00000120998 787 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 Gm15376-201ENSMUST00000122258 783 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 Gm16215-201ENSMUST00000161990 637 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.38□□□□□ -0.59
Sf3b6P59708 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 Gm26035-201ENSMUST00000083065 308 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.38□□□□□ -0.59
Sf3b6P59708 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Sf3b6P59708 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3b6P59708 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Sf3b6P59708 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Sf3b6P59708 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sf3b6P59708 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.37□□□□□ -0.59
Sf3b6P59708 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms