Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfaP20033 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfaP20033 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfaP20033 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfaP20033 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfaP20033 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdgfaP20033 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
PdgfaP20033 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.82□□□□□ -0.36
PdgfaP20033 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PdgfaP20033 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PdgfaP20033 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
PdgfaP20033 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
PdgfaP20033 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
PdgfaP20033 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.81□□□□□ -0.36
PdgfaP20033 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.81□□□□□ -0.36
PdgfaP20033 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.81□□□□□ -0.36
PdgfaP20033 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.81□□□□□ -0.36
PdgfaP20033 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.81□□□□□ -0.36
PdgfaP20033 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.81□□□□□ -0.36
PdgfaP20033 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PdgfaP20033 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.81□□□□□ -0.36
PdgfaP20033 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.81□□□□□ -0.36
PdgfaP20033 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
PdgfaP20033 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
PdgfaP20033 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.81□□□□□ -0.36
PdgfaP20033 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdgfaP20033 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.8□□□□□ -0.36
PdgfaP20033 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.8□□□□□ -0.36
PdgfaP20033 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PdgfaP20033 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PdgfaP20033 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.8□□□□□ -0.36
PdgfaP20033 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.8□□□□□ -0.36
PdgfaP20033 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
PdgfaP20033 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.8□□□□□ -0.36
PdgfaP20033 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
PdgfaP20033 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.8□□□□□ -0.36
PdgfaP20033 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PdgfaP20033 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PdgfaP20033 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PdgfaP20033 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdgfaP20033 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.79□□□□□ -0.36
PdgfaP20033 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PdgfaP20033 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.79□□□□□ -0.36
PdgfaP20033 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.79□□□□□ -0.36
PdgfaP20033 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PdgfaP20033 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Gm45331-201ENSMUST00000209868 554 ntBASIC12.79□□□□□ -0.36
PdgfaP20033 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.79□□□□□ -0.36
PdgfaP20033 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.79□□□□□ -0.36
PdgfaP20033 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdgfaP20033 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms