Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.37□□□□□ -0.91
TcraP01849 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.37□□□□□ -0.91
TcraP01849 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.37□□□□□ -0.91
TcraP01849 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.37□□□□□ -0.91
TcraP01849 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.37□□□□□ -0.91
TcraP01849 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TcraP01849 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
TcraP01849 Gm4995-201ENSMUST00000117247 432 ntBASIC9.36□□□□□ -0.91
TcraP01849 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
TcraP01849 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.36□□□□□ -0.91
TcraP01849 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.36□□□□□ -0.91
TcraP01849 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Gm27631-201ENSMUST00000184163 466 ntBASIC9.36□□□□□ -0.91
TcraP01849 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
TcraP01849 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
TcraP01849 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.36□□□□□ -0.91
TcraP01849 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
TcraP01849 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
TcraP01849 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
TcraP01849 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.36□□□□□ -0.91
TcraP01849 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.36□□□□□ -0.91
TcraP01849 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.36□□□□□ -0.91
TcraP01849 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TcraP01849 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.35□□□□□ -0.91
TcraP01849 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.35□□□□□ -0.91
TcraP01849 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms