Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hcn1O88704 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.3□□□□□ -0.44
Hcn1O88704 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hcn1O88704 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hcn1O88704 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hcn1O88704 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hcn1O88704 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hcn1O88704 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.3□□□□□ -0.44
Hcn1O88704 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.3□□□□□ -0.44
Hcn1O88704 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Hcn1O88704 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.3□□□□□ -0.44
Hcn1O88704 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hcn1O88704 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.3□□□□□ -0.44
Hcn1O88704 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.3□□□□□ -0.44
Hcn1O88704 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hcn1O88704 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.3□□□□□ -0.44
Hcn1O88704 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hcn1O88704 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.3□□□□□ -0.44
Hcn1O88704 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.29□□□□□ -0.44
Hcn1O88704 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.29□□□□□ -0.44
Hcn1O88704 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hcn1O88704 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.29□□□□□ -0.44
Hcn1O88704 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hcn1O88704 Gm24196-201ENSMUST00000179161 110 ntBASIC12.29□□□□□ -0.44
Hcn1O88704 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Hcn1O88704 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.29□□□□□ -0.44
Hcn1O88704 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Gm10012-201ENSMUST00000078252 192 ntBASIC12.29□□□□□ -0.44
Hcn1O88704 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.29□□□□□ -0.44
Hcn1O88704 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.29□□□□□ -0.44
Hcn1O88704 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.29□□□□□ -0.44
Hcn1O88704 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hcn1O88704 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hcn1O88704 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hcn1O88704 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms