Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NlkO54949 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.48□□□□□ -0.57
NlkO54949 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Gm27772-201ENSMUST00000184900 187 ntBASIC11.48□□□□□ -0.57
NlkO54949 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.48□□□□□ -0.57
NlkO54949 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.48□□□□□ -0.57
NlkO54949 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.48□□□□□ -0.57
NlkO54949 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.48□□□□□ -0.57
NlkO54949 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.48□□□□□ -0.57
NlkO54949 Gm9797-201ENSMUST00000052902 613 ntBASIC11.48□□□□□ -0.57
NlkO54949 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
NlkO54949 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.48□□□□□ -0.57
NlkO54949 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NlkO54949 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.48□□□□□ -0.57
NlkO54949 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.48□□□□□ -0.57
NlkO54949 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
NlkO54949 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.48□□□□□ -0.57
NlkO54949 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.48□□□□□ -0.57
NlkO54949 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NlkO54949 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.47□□□□□ -0.57
NlkO54949 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.47□□□□□ -0.57
NlkO54949 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NlkO54949 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
NlkO54949 Gm15321-201ENSMUST00000121290 288 ntBASIC11.47□□□□□ -0.57
NlkO54949 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Gm21854-201ENSMUST00000179901 471 ntBASIC11.47□□□□□ -0.57
NlkO54949 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.47□□□□□ -0.57
NlkO54949 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.47□□□□□ -0.57
NlkO54949 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NlkO54949 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.47□□□□□ -0.57
NlkO54949 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NlkO54949 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NlkO54949 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NlkO54949 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NlkO54949 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NlkO54949 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NlkO54949 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
NlkO54949 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NlkO54949 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
NlkO54949 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NlkO54949 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NlkO54949 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.46□□□□□ -0.57
NlkO54949 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
NlkO54949 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NlkO54949 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms