Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn3Q9ES97 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn3Q9ES97 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rtn3Q9ES97 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtn3Q9ES97 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Rtn3Q9ES97 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.71□□□□□ -0.22
Rtn3Q9ES97 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtn3Q9ES97 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.71□□□□□ -0.22
Rtn3Q9ES97 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtn3Q9ES97 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Rtn3Q9ES97 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtn3Q9ES97 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Snora78-201ENSMUST00000158630 128 ntBASIC13.7□□□□□ -0.22
Rtn3Q9ES97 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn3Q9ES97 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Mir1938-201ENSMUST00000158746 100 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gm29127-201ENSMUST00000188304 517 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtn3Q9ES97 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.68□□□□□ -0.22
Rtn3Q9ES97 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Gm14350-201ENSMUST00000116642 640 ntBASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Gm27731-201ENSMUST00000185192 107 ntBASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.68□□□□□ -0.22
Rtn3Q9ES97 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.68□□□□□ -0.22
Rtn3Q9ES97 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms