Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Gm10146-201ENSMUST00000072739 309 ntBASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne8Q9DC53 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Gm8213-201ENSMUST00000118191 441 ntBASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Gm24196-201ENSMUST00000179161 110 ntBASIC13.37□□□□□ -0.27
Cpne8Q9DC53 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Gm37497-201ENSMUST00000195830 798 ntBASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cpne8Q9DC53 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Gm12363-201ENSMUST00000122250 668 ntBASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne8Q9DC53 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms