Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Rfc4Q99J62 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.78□□□□□ -0.04
Rfc4Q99J62 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gm8959-201ENSMUST00000213150 571 ntBASIC14.78□□□□□ -0.04
Rfc4Q99J62 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc4Q99J62 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.77□□□□□ -0.04
Rfc4Q99J62 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc4Q99J62 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Gm13996-201ENSMUST00000118456 430 ntBASIC14.77□□□□□ -0.05
Rfc4Q99J62 Gm11331-201ENSMUST00000119764 288 ntBASIC14.77□□□□□ -0.05
Rfc4Q99J62 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rfc4Q99J62 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Mir7221-201ENSMUST00000184009 72 ntBASIC14.77□□□□□ -0.05
Rfc4Q99J62 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.77□□□□□ -0.05
Rfc4Q99J62 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfc4Q99J62 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.77□□□□□ -0.05
Rfc4Q99J62 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.77□□□□□ -0.05
Rfc4Q99J62 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.77□□□□□ -0.05
Rfc4Q99J62 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc4Q99J62 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms