Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdha8Q91Y12 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdha8Q91Y12 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdha8Q91Y12 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Pcdha8Q91Y12 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Pcdha8Q91Y12 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdha8Q91Y12 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdha8Q91Y12 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Gm11478-201ENSMUST00000117851 599 ntBASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Gm11814-201ENSMUST00000119515 929 ntBASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdha8Q91Y12 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Gm11803-201ENSMUST00000119966 444 ntBASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Gm28693-202ENSMUST00000190758 331 ntBASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Gm37922-201ENSMUST00000195596 455 ntBASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Gm7653-201ENSMUST00000214567 508 ntBASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha8Q91Y12 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha8Q91Y12 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha8Q91Y12 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha8Q91Y12 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.5□□□□□ -0.41
Pcdha8Q91Y12 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha8Q91Y12 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdha8Q91Y12 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdha8Q91Y12 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms