Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Gm12138-201ENSMUST00000122180 951 ntBASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb8Q91XZ2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm8213-201ENSMUST00000118191 441 ntBASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm10156-201ENSMUST00000122364 462 ntBASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb8Q91XZ2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Gm11803-201ENSMUST00000119966 444 ntBASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Gm13123-201ENSMUST00000122173 492 ntBASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms