Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Gm43822-201ENSMUST00000200285 476 ntBASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndc1Q8VCB1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndc1Q8VCB1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.15□□□□□ -0.47
Ndc1Q8VCB1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndc1Q8VCB1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndc1Q8VCB1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndc1Q8VCB1 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Olfr284-202ENSMUST00000206647 966 ntBASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.14□□□□□ -0.47
Ndc1Q8VCB1 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm6023-201ENSMUST00000118217 606 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm17208-201ENSMUST00000168388 535 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm29396-201ENSMUST00000185659 716 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm37042-201ENSMUST00000193816 581 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm3961-201ENSMUST00000204425 994 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Gm10608-202ENSMUST00000213924 676 ntBASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc1Q8VCB1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms