Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 BRI3BPP1-201ENST00000594224 787 ntBASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 AP003680.1-201ENST00000598970 3660 ntBASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC60Q8IWA6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 TMEM14DP-201ENST00000422205 345 ntBASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 AL442647.2-201ENST00000429864 857 ntBASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 RPSAP52-203ENST00000622976 1023 ntBASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC60Q8IWA6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 GK-202ENST00000378941 458 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 KRT18P43-201ENST00000469825 1281 ntBASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 AC000095.1-201ENST00000603208 874 ntBASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 AL033527.5-201ENST00000641382 801 ntBASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC60Q8IWA6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms