Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col16a1Q8BLX7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Gm11509-201ENSMUST00000117358 325 ntBASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Gm4607-201ENSMUST00000206649 577 ntBASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Gm45398-201ENSMUST00000210561 165 ntBASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Gm26035-201ENSMUST00000083065 308 ntBASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col16a1Q8BLX7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Gm12899-201ENSMUST00000120565 551 ntBASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Gm23085-201ENSMUST00000157849 293 ntBASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Gm3332-201ENSMUST00000189337 928 ntBASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 CT485607.1-201ENSMUST00000216100 85 ntBASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 AC153505.1-201ENSMUST00000218819 1071 ntBASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Gm25517-201ENSMUST00000083865 134 ntBASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col16a1Q8BLX7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col16a1Q8BLX7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Col16a1Q8BLX7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col16a1Q8BLX7 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm15573-201ENSMUST00000119487 540 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm15595-201ENSMUST00000120840 961 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm6397-201ENSMUST00000161973 1069 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 CT009713.8-202ENSMUST00000224732 385 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Gm7551-201ENSMUST00000089593 1074 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col16a1Q8BLX7 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms