Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atg4bQ8BGE6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm13813-201ENSMUST00000120998 787 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm1335-201ENSMUST00000121653 386 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm22121-201ENSMUST00000175148 54 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm26927-201ENSMUST00000182385 965 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm40466-201ENSMUST00000212174 422 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm10268-201ENSMUST00000085340 555 ntBASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atg4bQ8BGE6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Snord83b-201ENSMUST00000104546 94 ntBASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Gm15824-201ENSMUST00000119516 955 ntBASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Gm13829-201ENSMUST00000119600 138 ntBASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Gm4768-201ENSMUST00000206199 686 ntBASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.1□□□□□ -0.47
Atg4bQ8BGE6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atg4bQ8BGE6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms