Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Gm38158-201ENSMUST00000194617 339 ntBASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Gm38341-201ENSMUST00000195357 515 ntBASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Gm6334-201ENSMUST00000207083 228 ntBASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.62□□□□□ -0.39
Pcdh19Q80TF3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Gm13350-201ENSMUST00000120519 479 ntBASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh19Q80TF3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms