Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Gm12337-201ENSMUST00000119634 400 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Gm27910-201ENSMUST00000185004 107 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 BC106175-202ENSMUST00000219344 1213 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm45481-201ENSMUST00000209717 877 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm45598-202ENSMUST00000210719 986 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm17827-201ENSMUST00000211825 742 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rif1Q6PR54 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rif1Q6PR54 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm15003-201ENSMUST00000118884 446 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm40879-201ENSMUST00000220759 612 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.84□□□□□ -0.67
Rif1Q6PR54 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rif1Q6PR54 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Rif1Q6PR54 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.83□□□□□ -0.67
Rif1Q6PR54 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Daam2-202ENSMUST00000224595 1926 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms