Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Gm38144-201ENSMUST00000192790 465 ntBASIC12.04□□□□□ -0.48
Sox17Q61473 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.04□□□□□ -0.48
Sox17Q61473 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.04□□□□□ -0.48
Sox17Q61473 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Sox17Q61473 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sox17Q61473 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox17Q61473 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.04□□□□□ -0.48
Sox17Q61473 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.03□□□□□ -0.48
Sox17Q61473 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox17Q61473 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Sox17Q61473 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox17Q61473 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Sox17Q61473 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.03□□□□□ -0.48
Sox17Q61473 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.03□□□□□ -0.48
Sox17Q61473 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sox17Q61473 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox17Q61473 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox17Q61473 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox17Q61473 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox17Q61473 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox17Q61473 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Sox17Q61473 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox17Q61473 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox17Q61473 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox17Q61473 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox17Q61473 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox17Q61473 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox17Q61473 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox17Q61473 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Sox17Q61473 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sox17Q61473 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox17Q61473 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Gm14767-201ENSMUST00000121559 586 ntBASIC12.02□□□□□ -0.49
Sox17Q61473 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.02□□□□□ -0.49
Sox17Q61473 Gm7775-201ENSMUST00000218871 853 ntBASIC12.02□□□□□ -0.49
Sox17Q61473 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sox17Q61473 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Sox17Q61473 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Sox17Q61473 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms