Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Gm12859-201ENSMUST00000117834 427 ntBASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Gm45668-201ENSMUST00000211271 493 ntBASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cul4aQ3TCH7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Gm7488-201ENSMUST00000117148 684 ntBASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Gm11618-201ENSMUST00000117946 267 ntBASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Gm8598-201ENSMUST00000221184 836 ntBASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Gm15823-201ENSMUST00000064305 670 ntBASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cul4aQ3TCH7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Cul4aQ3TCH7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Gm14760-201ENSMUST00000121831 999 ntBASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Gm13123-201ENSMUST00000122173 492 ntBASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Cul4aQ3TCH7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms