Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdkn2bP55271 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdkn2bP55271 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdkn2bP55271 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdkn2bP55271 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdkn2bP55271 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdkn2bP55271 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdkn2bP55271 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdkn2bP55271 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.29□□□□□ -0.44
Cdkn2bP55271 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.29□□□□□ -0.44
Cdkn2bP55271 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Gm15429-201ENSMUST00000151268 798 ntBASIC12.29□□□□□ -0.44
Cdkn2bP55271 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Gm16215-201ENSMUST00000161990 637 ntBASIC12.29□□□□□ -0.44
Cdkn2bP55271 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Gm28631-201ENSMUST00000190740 334 ntBASIC12.29□□□□□ -0.44
Cdkn2bP55271 Gm20949-201ENSMUST00000206478 952 ntBASIC12.29□□□□□ -0.44
Cdkn2bP55271 Gm18473-201ENSMUST00000220543 868 ntBASIC12.29□□□□□ -0.44
Cdkn2bP55271 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdkn2bP55271 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.28□□□□□ -0.44
Cdkn2bP55271 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Gm19184-201ENSMUST00000196798 928 ntBASIC12.28□□□□□ -0.44
Cdkn2bP55271 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Gm16372-201ENSMUST00000073088 450 ntBASIC12.28□□□□□ -0.44
Cdkn2bP55271 Mir339-201ENSMUST00000083659 96 ntBASIC12.28□□□□□ -0.44
Cdkn2bP55271 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdkn2bP55271 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.28□□□□□ -0.44
Cdkn2bP55271 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms