Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.27□□□□□ -0.61
Upk2P38575 Gm4271-201ENSMUST00000174444 973 ntBASIC11.27□□□□□ -0.61
Upk2P38575 Gm23363-201ENSMUST00000175024 79 ntBASIC11.27□□□□□ -0.61
Upk2P38575 Gm27839-201ENSMUST00000184242 106 ntBASIC11.27□□□□□ -0.61
Upk2P38575 Gm29649-201ENSMUST00000185649 419 ntBASIC11.27□□□□□ -0.61
Upk2P38575 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.27□□□□□ -0.61
Upk2P38575 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.27□□□□□ -0.61
Upk2P38575 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.27□□□□□ -0.61
Upk2P38575 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.27□□□□□ -0.61
Upk2P38575 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Upk2P38575 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Upk2P38575 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk2P38575 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Upk2P38575 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Upk2P38575 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.26□□□□□ -0.61
Upk2P38575 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Upk2P38575 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.26□□□□□ -0.61
Upk2P38575 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.26□□□□□ -0.61
Upk2P38575 Gm4768-201ENSMUST00000206199 686 ntBASIC11.26□□□□□ -0.61
Upk2P38575 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Gm6091-201ENSMUST00000098307 165 ntBASIC11.26□□□□□ -0.61
Upk2P38575 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Upk2P38575 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Upk2P38575 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Upk2P38575 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Upk2P38575 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Upk2P38575 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Upk2P38575 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk2P38575 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.25□□□□□ -0.61
Upk2P38575 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk2P38575 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Upk2P38575 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk2P38575 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.25□□□□□ -0.61
Upk2P38575 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk2P38575 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk2P38575 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Upk2P38575 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk2P38575 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk2P38575 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Upk2P38575 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.25□□□□□ -0.61
Upk2P38575 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.25□□□□□ -0.61
Upk2P38575 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms