Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.33□□□□□ -0.44
Hcn1O88704 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.33□□□□□ -0.44
Hcn1O88704 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Hcn1O88704 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
Hcn1O88704 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.32□□□□□ -0.44
Hcn1O88704 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Gm4984-201ENSMUST00000115987 360 ntBASIC12.32□□□□□ -0.44
Hcn1O88704 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Gm8652-201ENSMUST00000181363 964 ntBASIC12.32□□□□□ -0.44
Hcn1O88704 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.32□□□□□ -0.44
Hcn1O88704 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hcn1O88704 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hcn1O88704 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.32□□□□□ -0.44
Hcn1O88704 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hcn1O88704 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Hcn1O88704 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.32□□□□□ -0.44
Hcn1O88704 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hcn1O88704 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hcn1O88704 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.32□□□□□ -0.44
Hcn1O88704 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hcn1O88704 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hcn1O88704 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hcn1O88704 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.31□□□□□ -0.44
Hcn1O88704 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Hcn1O88704 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Gm8598-201ENSMUST00000221184 836 ntBASIC12.31□□□□□ -0.44
Hcn1O88704 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.31□□□□□ -0.44
Hcn1O88704 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Hcn1O88704 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hcn1O88704 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hcn1O88704 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.31□□□□□ -0.44
Hcn1O88704 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.31□□□□□ -0.44
Hcn1O88704 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.31□□□□□ -0.44
Hcn1O88704 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hcn1O88704 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hcn1O88704 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hcn1O88704 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.3□□□□□ -0.44
Hcn1O88704 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms