Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.69□□□□□ -0.54
Matn3O35701 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.69□□□□□ -0.54
Matn3O35701 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn3O35701 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Matn3O35701 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Matn3O35701 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn3O35701 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Matn3O35701 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Matn3O35701 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn3O35701 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.69□□□□□ -0.54
Matn3O35701 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.69□□□□□ -0.54
Matn3O35701 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.69□□□□□ -0.54
Matn3O35701 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Matn3O35701 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn3O35701 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Matn3O35701 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.68□□□□□ -0.54
Matn3O35701 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.68□□□□□ -0.54
Matn3O35701 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.68□□□□□ -0.54
Matn3O35701 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Matn3O35701 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.68□□□□□ -0.54
Matn3O35701 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.68□□□□□ -0.54
Matn3O35701 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Matn3O35701 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Matn3O35701 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.68□□□□□ -0.54
Matn3O35701 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Matn3O35701 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.68□□□□□ -0.54
Matn3O35701 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.68□□□□□ -0.54
Matn3O35701 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
Matn3O35701 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.68□□□□□ -0.54
Matn3O35701 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Matn3O35701 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.67□□□□□ -0.54
Matn3O35701 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Matn3O35701 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.67□□□□□ -0.54
Matn3O35701 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Matn3O35701 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Gm15693-201ENSMUST00000120470 637 ntBASIC11.67□□□□□ -0.54
Matn3O35701 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.67□□□□□ -0.54
Matn3O35701 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.67□□□□□ -0.54
Matn3O35701 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Matn3O35701 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.67□□□□□ -0.54
Matn3O35701 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Gm27390-201ENSMUST00000184516 176 ntBASIC11.67□□□□□ -0.54
Matn3O35701 Gm17330-201ENSMUST00000221047 165 ntBASIC11.67□□□□□ -0.54
Matn3O35701 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Matn3O35701 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Matn3O35701 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Matn3O35701 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Matn3O35701 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Matn3O35701 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Matn3O35701 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
Matn3O35701 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms