Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm13612-201ENSMUST00000119276 390 ntBASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm38297-201ENSMUST00000195122 1057 ntBASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm11978-201ENSMUST00000122315 466 ntBASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm9794-201ENSMUST00000202370 423 ntBASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm7287-201ENSMUST00000205267 602 ntBASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.34□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms