Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5-4A0A075B652 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Gm37917-201ENSMUST00000194711 392 ntBASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5-4A0A075B652 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Mir6392-201ENSMUST00000184924 108 ntBASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.79□□□□□ -0.68
Trav5-4A0A075B652 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav5-4A0A075B652 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms