Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Mir7221-201ENSMUST00000184009 72 ntBASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cldnd1Q9CQX5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Gm14058-201ENSMUST00000116082 735 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Gm15515-201ENSMUST00000117827 822 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Gm12029-201ENSMUST00000120073 832 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Gm39404-201ENSMUST00000216350 313 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cldnd1Q9CQX5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Gm16296-201ENSMUST00000159905 325 ntBASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Gm9540-201ENSMUST00000188230 478 ntBASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldnd1Q9CQX5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms