Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm8463-201ENSMUST00000208573 613 ntBASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Gm6218-201ENSMUST00000219812 628 ntBASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox30Q8CGW4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Gm11618-201ENSMUST00000117946 267 ntBASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Gm13123-201ENSMUST00000122173 492 ntBASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Mir7023-201ENSMUST00000185093 64 ntBASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Gm8099-201ENSMUST00000200510 742 ntBASIC14.04□□□□□ -0.16
Sox30Q8CGW4 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox30Q8CGW4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Gm8598-201ENSMUST00000221184 836 ntBASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox30Q8CGW4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms