Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vcpip1Q8CDG3 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.86□□□□□ -0.19
Vcpip1Q8CDG3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.86□□□□□ -0.19
Vcpip1Q8CDG3 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.86□□□□□ -0.19
Vcpip1Q8CDG3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcpip1Q8CDG3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vcpip1Q8CDG3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcpip1Q8CDG3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vcpip1Q8CDG3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Gm9002-201ENSMUST00000178437 499 ntBASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Gm18473-201ENSMUST00000220543 868 ntBASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcpip1Q8CDG3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Gm4984-201ENSMUST00000115987 360 ntBASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Gm2495-201ENSMUST00000191160 466 ntBASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcpip1Q8CDG3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vcpip1Q8CDG3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vcpip1Q8CDG3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vcpip1Q8CDG3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Gm14350-201ENSMUST00000116642 640 ntBASIC13.83□□□□□ -0.2
Vcpip1Q8CDG3 Gm11425-201ENSMUST00000119608 498 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms