Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm15131-201ENSMUST00000119124 595 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm27552-201ENSMUST00000183351 62 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm27844-201ENSMUST00000183613 62 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm27438-201ENSMUST00000183480 110 ntBASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm8712-201ENSMUST00000221090 701 ntBASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a6Q8C6K9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.55
Col6a6Q8C6K9 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Col6a6Q8C6K9 Gm11667-201ENSMUST00000119828 486 ntBASIC11.58□□□□□ -0.55
Col6a6Q8C6K9 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.58□□□□□ -0.55
Col6a6Q8C6K9 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.58□□□□□ -0.55
Col6a6Q8C6K9 Gm43058-201ENSMUST00000197645 625 ntBASIC11.58□□□□□ -0.55
Col6a6Q8C6K9 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col6a6Q8C6K9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col6a6Q8C6K9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms