Protein–RNA interactions for Protein: Q8BKI2

Tnrc6b, Trinucleotide repeat-containing gene 6B protein, mousemouse

Known RBP Predictions only

Length 1,810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6bQ8BKI2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6bQ8BKI2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6bQ8BKI2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6bQ8BKI2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6bQ8BKI2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Gm13809-201ENSMUST00000117921 597 ntBASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Gm15595-201ENSMUST00000120840 961 ntBASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Gm27438-201ENSMUST00000183480 110 ntBASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Gm10288-201ENSMUST00000084614 537 ntBASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.68■□□□□ 0.26
Tnrc6bQ8BKI2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6bQ8BKI2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Mir7677-201ENSMUST00000184226 67 ntBASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Gm42629-201ENSMUST00000199063 1102 ntBASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Gm6485-201ENSMUST00000160676 439 ntBASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Gm44980-201ENSMUST00000205826 314 ntBASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6bQ8BKI2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6bQ8BKI2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6bQ8BKI2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6bQ8BKI2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6bQ8BKI2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6bQ8BKI2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6bQ8BKI2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6bQ8BKI2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6bQ8BKI2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6bQ8BKI2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms