Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Gm18304-201ENSMUST00000189162 546 ntBASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Gm4607-201ENSMUST00000206649 577 ntBASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 CT571245.2-201ENSMUST00000218421 305 ntBASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Gm9361-201ENSMUST00000198695 1507 ntBASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Gm45909-201ENSMUST00000212413 1031 ntBASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 AC133602.1-201ENSMUST00000227510 509 ntBASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd4Q6PDQ2 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd4Q6PDQ2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Gm11941-201ENSMUST00000119904 610 ntBASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Gm26035-201ENSMUST00000083065 308 ntBASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd4Q6PDQ2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm12616-201ENSMUST00000118594 382 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm25881-201ENSMUST00000157783 103 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm12624-201ENSMUST00000177615 382 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm12621-201ENSMUST00000177760 382 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm12615-201ENSMUST00000177970 382 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm12622-201ENSMUST00000177975 382 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm12627-201ENSMUST00000178412 382 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm12625-201ENSMUST00000179122 382 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm12614-201ENSMUST00000179586 382 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm12613-201ENSMUST00000180323 382 ntBASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC16.46■□□□□ 0.23
Chd4Q6PDQ2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms