Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col11a2Q64739 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Gm8737-201ENSMUST00000122208 642 ntBASIC15.21■□□□□ 0.03
Col11a2Q64739 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col11a2Q64739 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Col11a2Q64739 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC15.21■□□□□ 0.03
Col11a2Q64739 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.21■□□□□ 0.03
Col11a2Q64739 Gm21092-201ENSMUST00000178995 955 ntBASIC15.21■□□□□ 0.03
Col11a2Q64739 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.21■□□□□ 0.03
Col11a2Q64739 Gm45575-201ENSMUST00000210283 548 ntBASIC15.21■□□□□ 0.03
Col11a2Q64739 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.21■□□□□ 0.03
Col11a2Q64739 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col11a2Q64739 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a2Q64739 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col11a2Q64739 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Col11a2Q64739 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col11a2Q64739 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col11a2Q64739 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col11a2Q64739 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.21■□□□□ 0.02
Col11a2Q64739 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Gm28324-201ENSMUST00000187913 264 ntBASIC15.2■□□□□ 0.02
Col11a2Q64739 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Gm44552-201ENSMUST00000205458 1247 ntBASIC15.2■□□□□ 0.02
Col11a2Q64739 Gm9139-201ENSMUST00000218817 700 ntBASIC15.2■□□□□ 0.02
Col11a2Q64739 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.2■□□□□ 0.02
Col11a2Q64739 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Col11a2Q64739 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.2■□□□□ 0.02
Col11a2Q64739 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.2■□□□□ 0.02
Col11a2Q64739 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.2■□□□□ 0.02
Col11a2Q64739 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Gm3619-201ENSMUST00000219947 775 ntBASIC15.2■□□□□ 0.02
Col11a2Q64739 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a2Q64739 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col11a2Q64739 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.19■□□□□ 0.02
Col11a2Q64739 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.19■□□□□ 0.02
Col11a2Q64739 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a2Q64739 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col11a2Q64739 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms