Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Gm12997-201ENSMUST00000120207 640 ntBASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Gm44967-201ENSMUST00000207047 631 ntBASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Gm5363-201ENSMUST00000211927 938 ntBASIC15.29■□□□□ 0.04
Spg7Q3ULF4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Spg7Q3ULF4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Gm14109-201ENSMUST00000118814 309 ntBASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Gm18827-201ENSMUST00000188341 790 ntBASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Spg7Q3ULF4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Gm14017-201ENSMUST00000121934 386 ntBASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Spg7Q3ULF4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms