Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.53□□□□□ -0.4
Mmp11Q02853 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.53□□□□□ -0.4
Mmp11Q02853 Gm19163-201ENSMUST00000223313 780 ntBASIC12.53□□□□□ -0.4
Mmp11Q02853 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Mmp11Q02853 Mir339-201ENSMUST00000083659 96 ntBASIC12.53□□□□□ -0.4
Mmp11Q02853 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Mmp11Q02853 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mmp11Q02853 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp11Q02853 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Mmp11Q02853 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp11Q02853 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp11Q02853 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp11Q02853 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp11Q02853 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp11Q02853 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp11Q02853 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mmp11Q02853 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Mmp11Q02853 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Mmp11Q02853 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.52□□□□□ -0.41
Mmp11Q02853 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.52□□□□□ -0.41
Mmp11Q02853 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.52□□□□□ -0.41
Mmp11Q02853 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.52□□□□□ -0.41
Mmp11Q02853 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Gm18187-201ENSMUST00000196476 984 ntBASIC12.52□□□□□ -0.41
Mmp11Q02853 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Gm43818-201ENSMUST00000200605 466 ntBASIC12.52□□□□□ -0.41
Mmp11Q02853 Gm4768-201ENSMUST00000206199 686 ntBASIC12.52□□□□□ -0.41
Mmp11Q02853 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Mmp11Q02853 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.52□□□□□ -0.41
Mmp11Q02853 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.52□□□□□ -0.41
Mmp11Q02853 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.52□□□□□ -0.41
Mmp11Q02853 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.52□□□□□ -0.41
Mmp11Q02853 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.52□□□□□ -0.41
Mmp11Q02853 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Mmp11Q02853 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Mmp11Q02853 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Mmp11Q02853 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp11Q02853 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Mmp11Q02853 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Mmp11Q02853 Gm1335-201ENSMUST00000121653 386 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Mmp11Q02853 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.51□□□□□ -0.41
Mmp11Q02853 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Gm26927-201ENSMUST00000182385 965 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.51□□□□□ -0.41
Mmp11Q02853 Gm40466-201ENSMUST00000212174 422 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Gm32025-201ENSMUST00000217960 307 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Mmp11Q02853 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Gm10268-201ENSMUST00000085340 555 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Mmp11Q02853 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.51□□□□□ -0.41
Mmp11Q02853 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Mmp11Q02853 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp11Q02853 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms