Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Gm12241-201ENSMUST00000118330 726 ntBASIC12.69□□□□□ -0.38
CtskP55097 Gm13786-201ENSMUST00000122371 333 ntBASIC12.69□□□□□ -0.38
CtskP55097 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.69□□□□□ -0.38
CtskP55097 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.69□□□□□ -0.38
CtskP55097 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.69□□□□□ -0.38
CtskP55097 Gm24526-201ENSMUST00000082921 158 ntBASIC12.69□□□□□ -0.38
CtskP55097 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CtskP55097 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.69□□□□□ -0.38
CtskP55097 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CtskP55097 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CtskP55097 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CtskP55097 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CtskP55097 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.68□□□□□ -0.38
CtskP55097 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Gm11591-201ENSMUST00000120063 702 ntBASIC12.68□□□□□ -0.38
CtskP55097 Gm11637-201ENSMUST00000120601 592 ntBASIC12.68□□□□□ -0.38
CtskP55097 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.68□□□□□ -0.38
CtskP55097 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.68□□□□□ -0.38
CtskP55097 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Gm38341-201ENSMUST00000195357 515 ntBASIC12.68□□□□□ -0.38
CtskP55097 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.68□□□□□ -0.38
CtskP55097 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Gm45865-201ENSMUST00000211815 945 ntBASIC12.68□□□□□ -0.38
CtskP55097 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.68□□□□□ -0.38
CtskP55097 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.68□□□□□ -0.38
CtskP55097 CT009764.1-201ENSMUST00000222260 483 ntBASIC12.68□□□□□ -0.38
CtskP55097 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CtskP55097 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.68□□□□□ -0.38
CtskP55097 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CtskP55097 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CtskP55097 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CtskP55097 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CtskP55097 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.67□□□□□ -0.38
CtskP55097 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CtskP55097 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CtskP55097 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Gm4857-201ENSMUST00000192718 785 ntBASIC12.67□□□□□ -0.38
CtskP55097 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.67□□□□□ -0.38
CtskP55097 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.67□□□□□ -0.38
CtskP55097 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.67□□□□□ -0.38
CtskP55097 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.67□□□□□ -0.38
CtskP55097 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.67□□□□□ -0.38
CtskP55097 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.67□□□□□ -0.38
CtskP55097 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CtskP55097 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.67□□□□□ -0.38
CtskP55097 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.67□□□□□ -0.38
CtskP55097 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.67□□□□□ -0.38
CtskP55097 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CtskP55097 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms