Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HTTP42858 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HTTP42858 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HTTP42858 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.47■□□□□ 0.39
HTTP42858 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.47■□□□□ 0.39
HTTP42858 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.47■□□□□ 0.39
HTTP42858 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.47■□□□□ 0.39
HTTP42858 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.47■□□□□ 0.39
HTTP42858 AL353770.1-201ENST00000614915 403 ntBASIC17.47■□□□□ 0.39
HTTP42858 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HTTP42858 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.47■□□□□ 0.39
HTTP42858 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.47■□□□□ 0.39
HTTP42858 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
HTTP42858 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.47■□□□□ 0.39
HTTP42858 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.47■□□□□ 0.39
HTTP42858 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.47■□□□□ 0.39
HTTP42858 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.47■□□□□ 0.39
HTTP42858 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 AC242376.1-201ENST00000559033 726 ntBASIC17.47■□□□□ 0.39
HTTP42858 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.47■□□□□ 0.39
HTTP42858 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.47■□□□□ 0.39
HTTP42858 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HTTP42858 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HTTP42858 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTTP42858 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTTP42858 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HTTP42858 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.46■□□□□ 0.39
HTTP42858 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTTP42858 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.46■□□□□ 0.39
HTTP42858 IGHV3-37-201ENST00000518544 340 ntBASIC17.46■□□□□ 0.39
HTTP42858 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.46■□□□□ 0.39
HTTP42858 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HTTP42858 RPL17P45-201ENST00000586289 509 ntBASIC17.46■□□□□ 0.39
HTTP42858 AL805961.1-203ENST00000641078 1258 ntBASIC17.46■□□□□ 0.39
HTTP42858 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HTTP42858 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HTTP42858 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HTTP42858 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.46■□□□□ 0.39
HTTP42858 MARK2P5-201ENST00000507649 634 ntBASIC17.46■□□□□ 0.39
HTTP42858 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.46■□□□□ 0.39
HTTP42858 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.46■□□□□ 0.39
HTTP42858 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HTTP42858 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.46■□□□□ 0.38
HTTP42858 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HTTP42858 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.46■□□□□ 0.38
HTTP42858 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
HTTP42858 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
HTTP42858 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HTTP42858 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HTTP42858 DPM3-202ENST00000368399 517 ntBASIC17.45■□□□□ 0.38
HTTP42858 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.45■□□□□ 0.38
HTTP42858 MIR6842-201ENST00000612539 65 ntBASIC17.45■□□□□ 0.38
HTTP42858 ENPP7P14-201ENST00000621765 1040 ntBASIC17.45■□□□□ 0.38
HTTP42858 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HTTP42858 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HTTP42858 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.45■□□□□ 0.38
HTTP42858 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HTTP42858 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
HTTP42858 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 AC097065.1-201ENST00000425737 517 ntBASIC17.45■□□□□ 0.38
HTTP42858 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.45■□□□□ 0.38
HTTP42858 AC009084.3-201ENST00000623356 437 ntBASIC17.45■□□□□ 0.38
HTTP42858 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.45■□□□□ 0.38
HTTP42858 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
HTTP42858 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HTTP42858 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.45■□□□□ 0.38
HTTP42858 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms