Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rfc1P35601 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Rfc1P35601 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.58□□□□□ -0.24
Rfc1P35601 Gm13616-201ENSMUST00000120600 222 ntBASIC13.58□□□□□ -0.24
Rfc1P35601 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.58□□□□□ -0.24
Rfc1P35601 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rfc1P35601 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.58□□□□□ -0.24
Rfc1P35601 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Rfc1P35601 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfc1P35601 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Rfc1P35601 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.57□□□□□ -0.24
Rfc1P35601 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.57□□□□□ -0.24
Rfc1P35601 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.57□□□□□ -0.24
Rfc1P35601 Gm27680-201ENSMUST00000184192 160 ntBASIC13.57□□□□□ -0.24
Rfc1P35601 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.57□□□□□ -0.24
Rfc1P35601 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.57□□□□□ -0.24
Rfc1P35601 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.57□□□□□ -0.24
Rfc1P35601 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.57□□□□□ -0.24
Rfc1P35601 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Rfc1P35601 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfc1P35601 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rfc1P35601 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.56□□□□□ -0.24
Rfc1P35601 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.56□□□□□ -0.24
Rfc1P35601 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Gm44344-201ENSMUST00000200287 129 ntBASIC13.56□□□□□ -0.24
Rfc1P35601 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Gm6888-201ENSMUST00000221983 706 ntBASIC13.56□□□□□ -0.24
Rfc1P35601 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.56□□□□□ -0.24
Rfc1P35601 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.56□□□□□ -0.24
Rfc1P35601 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rfc1P35601 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfc1P35601 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms