Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.42□□□□□ -0.1
Col2a1P28481 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col2a1P28481 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Col2a1P28481 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.41□□□□□ -0.1
Col2a1P28481 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col2a1P28481 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Gm18734-201ENSMUST00000172937 808 ntBASIC14.41□□□□□ -0.1
Col2a1P28481 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.41□□□□□ -0.1
Col2a1P28481 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Col2a1P28481 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col2a1P28481 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.41□□□□□ -0.1
Col2a1P28481 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col2a1P28481 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.4□□□□□ -0.1
Col2a1P28481 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Col2a1P28481 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col2a1P28481 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.4□□□□□ -0.1
Col2a1P28481 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.4□□□□□ -0.1
Col2a1P28481 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Col2a1P28481 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.4□□□□□ -0.1
Col2a1P28481 Gm18753-201ENSMUST00000201000 566 ntBASIC14.4□□□□□ -0.1
Col2a1P28481 Gm18730-201ENSMUST00000218038 343 ntBASIC14.4□□□□□ -0.1
Col2a1P28481 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.4□□□□□ -0.1
Col2a1P28481 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Col2a1P28481 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col2a1P28481 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.4□□□□□ -0.1
Col2a1P28481 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.4□□□□□ -0.1
Col2a1P28481 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Col2a1P28481 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col2a1P28481 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col2a1P28481 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col2a1P28481 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col2a1P28481 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col2a1P28481 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col2a1P28481 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col2a1P28481 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col2a1P28481 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.39□□□□□ -0.11
Col2a1P28481 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.39□□□□□ -0.11
Col2a1P28481 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col2a1P28481 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.39□□□□□ -0.11
Col2a1P28481 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Col2a1P28481 Gm27552-201ENSMUST00000183351 62 ntBASIC14.39□□□□□ -0.11
Col2a1P28481 Gm27844-201ENSMUST00000183613 62 ntBASIC14.39□□□□□ -0.11
Col2a1P28481 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.39□□□□□ -0.11
Col2a1P28481 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col2a1P28481 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.39□□□□□ -0.11
Col2a1P28481 Gm43138-201ENSMUST00000199123 708 ntBASIC14.39□□□□□ -0.11
Col2a1P28481 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.39□□□□□ -0.11
Col2a1P28481 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms