Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Gm8199-201ENSMUST00000121323 823 ntBASIC15.5■□□□□ 0.07
Col4a1P02463 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Gm10731-201ENSMUST00000181171 448 ntBASIC15.5■□□□□ 0.07
Col4a1P02463 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.5■□□□□ 0.07
Col4a1P02463 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.5■□□□□ 0.07
Col4a1P02463 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.5■□□□□ 0.07
Col4a1P02463 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.5■□□□□ 0.07
Col4a1P02463 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.49■□□□□ 0.07
Col4a1P02463 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col4a1P02463 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col4a1P02463 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.49■□□□□ 0.07
Col4a1P02463 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.49■□□□□ 0.07
Col4a1P02463 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Gm12164-201ENSMUST00000121695 551 ntBASIC15.49■□□□□ 0.07
Col4a1P02463 Gm12208-201ENSMUST00000122004 163 ntBASIC15.49■□□□□ 0.07
Col4a1P02463 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.49■□□□□ 0.07
Col4a1P02463 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.49■□□□□ 0.07
Col4a1P02463 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.49■□□□□ 0.07
Col4a1P02463 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.49■□□□□ 0.07
Col4a1P02463 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col4a1P02463 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Col4a1P02463 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.49■□□□□ 0.07
Col4a1P02463 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col4a1P02463 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a1P02463 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col4a1P02463 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.48■□□□□ 0.07
Col4a1P02463 Gm12196-201ENSMUST00000120954 262 ntBASIC15.48■□□□□ 0.07
Col4a1P02463 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.48■□□□□ 0.07
Col4a1P02463 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.48■□□□□ 0.07
Col4a1P02463 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.48■□□□□ 0.07
Col4a1P02463 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.48■□□□□ 0.07
Col4a1P02463 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Col4a1P02463 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.48■□□□□ 0.07
Col4a1P02463 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col4a1P02463 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.48■□□□□ 0.07
Col4a1P02463 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col4a1P02463 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Gm12616-201ENSMUST00000118594 382 ntBASIC15.48■□□□□ 0.07
Col4a1P02463 Gm7722-201ENSMUST00000120646 741 ntBASIC15.48■□□□□ 0.07
Col4a1P02463 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col4a1P02463 Gm12624-201ENSMUST00000177615 382 ntBASIC15.48■□□□□ 0.07
Col4a1P02463 Gm12621-201ENSMUST00000177760 382 ntBASIC15.48■□□□□ 0.07
Col4a1P02463 Gm12615-201ENSMUST00000177970 382 ntBASIC15.48■□□□□ 0.07
Col4a1P02463 Gm12622-201ENSMUST00000177975 382 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms