Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Gm24514-201ENSMUST00000174961 285 ntBASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Spcs1-203ENSMUST00000226374 592 ntBASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 AC154276.3-201ENSMUST00000227643 998 ntBASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Gm5455-201ENSMUST00000058710 715 ntBASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcf11G3X9Z4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Gm11450-201ENSMUST00000121144 333 ntBASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcf11G3X9Z4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Gm11509-201ENSMUST00000117358 325 ntBASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Gm12196-201ENSMUST00000120954 262 ntBASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Mir6546-201ENSMUST00000184460 62 ntBASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Gm18041-201ENSMUST00000218210 618 ntBASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcf11G3X9Z4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Gm14058-201ENSMUST00000116082 735 ntBASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Gm11941-201ENSMUST00000119904 610 ntBASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Pcf11G3X9Z4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms